AAV Testing Services

  • Comprehensive AAV testing covering titer, purity, safety, and more
  • Fast, reliable results with expert guidance
  • Tailored solutions ensuring top quality and safety standards
Mass Photometry
  • What We Provide

    Accelerate your gene therapy development with PackGene’s industry-leading AAV analytical service. Our comprehensive portfolio covers all critical phases—from discovery to GMP release—delivering premium AAV testing and data-driven AAV analytics to over 430 clients and 35 clinical programs worldwide. Rely on us for lightning-fast turnaround (2–3 days), globally trusted results, and streamlined cGMP workflows.

    • Comprehensive AAV testing: Covering titer, purity, safety, and more —our AAV analytical service delivers extensive assay options for every phase of your project.
    • Fast, reliable results with expert guidance: Accelerate your gene therapy development with lightning-fast AAV testing turnaround and dedicated analytical support.
    • Tailored solutions ensuring top quality and safety standards: Our customizable AAV analytical services guarantee industry-leading accuracy, compliance, and reliability.
  • AAV Titration

    Precise qPCR, ddPCR, and ELISA-based quantification to support all AAV testing workflows. Measures the quantity and functionality of AAV vectors to ensure consistent production, proper dosing, and reproducibility. This includes genome copy number, capsid particle counts, and infectious titers, which are critical for quality control and downstream applications in research and therapeutic development.

    Tests:

    • AAV Genome Titration by ddPCR
    • AAV Capsid Titration by ELISA
    • Infectious Titer by TCID50
    • Capsid Titer by SEC-HPLC
  • Genome Integrity

    High-resolution CE and sequencing verifying payload fidelity—key to robust AAV analytics. Assesses the integrity and structure of packaged genomes using advanced sequencing and capillary electrophoresis. Ensures the presence of full-length genomes, detects truncations or rearrangements, and supports regulatory requirements for therapeutic vector quality.

    Tests:

    • AAV Genome Integrity by Capillary Electrophoresis(CE)
    • AAV Genomic Sequencing by NanoporeSequencing (aka 3rd Generation Sequencing)
    • AAV Genome Integrity by Alkaline Gel Electrophoresis(AGE)
  • Capsid Characterization

    Mass photometry and analytical ultracentrifugation for full/empty capsid ratio, essential for reliable AAV analytical service. Characterizes AAV capsids using cutting-edge mass photometry to directly quantify the ratio of full to empty particles and assess overall vector composition. Analytical ultracentrifugation is employed alongside other orthogonal methods for confirmatory analysis. These techniques provide highly accurate data on vector stability, purity, and batch consistency for research, IND, and GMP release.

    Tests:

    • AAV Empty Capsid Rate by Mass Photometry (MP)
    • AAV Empty Capsid Rate by Analytical Ultra-Centrifugation (AUC)
    • AAV Capsid Imaging by Transmitted Electron Microscopy (TEM; 5 Micrographs + Report)
    • AAV Hydrodynamic Size and Aggregation by Dynamic Light Scattering (DLS)
    • AAV Capsid Peptide Mapping by HPLC-MS/MS
    • Capsid Protein Molecular Weight and Ratio by RP-HPLC-MS
  • Capsid Integrity

    Functional and physical assays assure capsid stability and quality as part of advanced AAV analytics. Evaluates the structural integrity and biological activity of AAV capsids to guarantee vector functionality. Critical for downstream processes and therapeutic performance. .

    Tests:

    • Capsid Purity by SDS-PAGE
    • Capsid Purity by CE-SDS
    • Purity Analysis by AEC-HPLC
    • Purity and Aggregation Analysis by SEC-HPLC
    • AAV Appearance by Visual Inspection
    • Subvisible Particles by Light Obscuration
    • Osmolarity by Freezing Point
  • Contaminants DNA

    Sensitive contaminant screening to ensure clean results—core to all premium AAV analytical services. Detects and quantifies residual host cell DNA, plasmid DNA,  or other unwanted genetic material present in the AAV preparation. Supports risk mitigation and compliance for GMP production and therapeutic applications.

    Tests:

    • Residual Host HEK293 Cell DNA Quantification by qPCR
    • Residual HEK293 Host Cell DNA Sizing by qPCR
    • Residual Plasmid DNA by ddPCR
    • Residual E1A by ddPCR
  • Contaminants Protein and Reagents

    Screens for process-related residuals such as helper virus, host cell proteins, and chemical contaminants. Ensures products meet rigorous quality and safety standards for clinical or commercial use.

    Tests:

    • Residual Host Cell Protein by ELISA
    • Residual BSA by ELISA
    • Residual Nuclease by ELISA
    • Residual Affinity Ligands by ELISA
    • Residual PEI by HPLC
    • Residual Tween 20 by HPLC
    • Residual Triton X100 by HPLC
    • Residual Iodixanol by HPLC
    • Residual Poloxamer 188 by HPLC
    • Residual Triton Analysis (Bundle with Endo Removal) by HPLC
  • What We Provide
  • AAV Titration
  • Genome Integrity
  • Capsid Characterization
  • Capsid Integrity
  • Contaminants DNA
  • Contaminants Protein and Reagents
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Key Benefits

  • Globally Trusted AAV Analytics Track Record

    Over 10,000 projects supported with rigorous protocols for regulatory-ready AAV analytical service.
  • Lightning-Fast AAV Testing Results

    Decision-making accelerated with results in as few as 2–3 days.
  • All-In-One AAV Analytics Solutions

    40+ established assays ensure seamless transition from research to GMP.
  • Premium Quality at Competitive Pricing

    Safety assays from $180, quality tests from $380/protocol.
  • Expert Guidance & Scalable Solutions

    Technical expertise supporting IND filing, GMP release, and process optimization.

Service Details

We offer more than 40 standardized AAV quality assays, providing comprehensive AAV testing and analytics for every stage of your gene therapy program.

Category Key Analytical Test Method TAT (BDs)
Critical Quality Attributes AAV Genome Integrity (CE) Capillary Electrophoresis 5
AAV Genome Integrity (AGE) Agarose Gel Electrophoresis 6
AAV Genomic Sequencing 3rd Generation Sequencing 5-10
AAV Empty Capsid Rate (AUC) Analytical Ultra Centrifugation 5
AAV Empty Capsid Rate (MP) Mass Photometry 3
Potency / Titer AAV Genome Titration qPCR and ddPCR 5
AAV Capsid Titration ELISA 5
Infectious Titer (TCID50) cell-based assay 21
Potency Assay cell-based assay 21
Safety Endotoxin Test LAL or Kinetic Chromogenic Assays 3
Mycoplasma Detection qPCR 2-3
Bioburden Test plate count method 5
Replication Competent AAV Detection cell-based assay 21
Capsid Characterization Purity & Aggregation Empty/Full Capsid Ratio Analysis TEM (5 pictures + report) 3-5
Capsid Size and Aggregation Analysis Dynamic Light Scattering 2-3
Capsid Peptide Mapping HPLC-MS/MS 21
Capsid Protein M.W. and Ratio Analysis RP-HPLC-MS 21
Capsid Protein Profile Analysis SDS-PAGE + Silver Stain / Coomassie 2-5
Capsid Purity Analysis AEC-HPLC 5
Capsid Purity and Aggregation Analysis SEC-HPLC 5
Residual Host Cell & Plasmid DNA Residual HEK293 Host Cell DNA qPCR 5
Residual Plasmid DNA ddPCR 5
Residual E1A DNA ddPCR 5
Residual Host Cell Protein ELISA 5
Residual Process Impurities (Proteins) Residual BSA ELISA 5
Residual Nuclease ELISA 5
Residual Affinity Ligands ELISA 5
Residual Transfection Reagent HPLC 5
Residual Process Impurities (Chemicals)
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Residual Tween20 HPLC 5
Residual Triton X-100 HPLC 5
Residual Iodixanol HPLC 5
Residual Poloxamer 188 HPLC 5

Performance

  • AAV Genome Titer by digital droplet PCR (ddPCR)

    Our advanced AAV analytical service employs ddPCR for high-precision viral genome quantification, supporting accurate dosing and lot consistency in gene therapy. Learn more about AAV genome titer by ddPCR

    AAV genome titer by ddPCR

    Figure 1. AAV testing performance data: ddPCR scatter plot illustrates robust quantification of viral genome copies, delivering reliable titer measurements essential for regulatory compliance and therapeutic success.

  • AAV Capsid Characterization by Mass Photometry (MP)

  • AAV Genome Sequencing by Nanopore

  • Replication Competent AAV (rcAAV) Analysis by qPCR

  • Analysis by Analytical Ultracentrifugation (AUC) with Optional TEM Imaging

  • AAV Genome Integrity by Capillary Electrophoresis (CE)

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